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E71.540 ICD-10-CM Code: Rhizomelic chondrodysplasia punctata

E71.540 is not a CMS-HCC payment code. MEAT criteria · RAF calculator · HCC Buddy coding tools

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FY 2026 Apr update / Endocrine, nutritional and metabolic diseases (E00-E89) / Metabolic disorders (E70-E88)

E71.540

Billable / SpecificICD-10-CMOfficial ICD-10-CMCodebook guidance

Rhizomelic chondrodysplasia punctata

A rare genetic disorder affecting bone development and causing shortened limbs, intellectual disability, and vision problems due to abnormal peroxisome function.

Buddy the Bee presenting code insight

Buddy Insight

Rhizomelic chondrodysplasia punctata is a severe peroxisomal disorder characterized by proximal limb shortening (rhizomelia), stippled calcification of epiphyses (chondrodysplasia punctata), cataracts, and severe intellectual disability.

CMS-HCC V28

N/A

Not mapped

CMS-HCC V24

HCC 23

RAF 0.194

ACA/HHS

HCC 28

Varies by metal level

ESRD/PACE

HCC 23

RAF 0.036

RXHCC

HCC 43

RAF 0.063

Code Book Path

Official
E71.5Peroxisomal disorders
E71.54Other peroxisomal disorders
E71.540Rhizomelic chondrodysplasia punctata

Inclusion Terms

Official

ICD-10-CM does not list inclusion terms for E71.540 in this effective period.

Excludes 2

Official

ICD-10-CM does not list Excludes 2 notes for E71.540 in this effective period.

Related Child Codes

Official
E71.541Zellweger-like syndrome
E71.542Other group 3 peroxisomal disorders
E71.548Other peroxisomal disorders

Includes

Official

ICD-10-CM does not list Includes notes for E71.540 in this effective period.

Excludes 1

Official

ICD-10-CM does not list Excludes 1 notes for E71.540 in this effective period.

Code First

Official

ICD-10-CM does not list Code First sequencing instructions for E71.540 in this effective period.

Use Additional

Official

ICD-10-CM does not list Use Additional Code instructions for E71.540 in this effective period.

Code Also

Official

ICD-10-CM does not list Code Also instructions for E71.540 in this effective period.

Buddy Documentation Tip

HCC Buddy guidance
Document radiographic findings showing stippled epiphyses and rhizomelic shortening, ophthalmologic findings (cataracts), plasmalogen levels (severely decreased), genetic testing identifying PEX7, GNPAT, or AGPS mutations, developmental status, and supportive care plan.
Record the specific genetic subtype if determined.

MEAT Support

HCC Buddy guidance
Document radiographic findings showing stippled epiphyses and rhizomelic shortening, ophthalmologic findings (cataracts), plasmalogen levels (severely decreased), genetic testing identifying PEX7, GNPAT, or AGPS mutations, developmental status, and supportive care plan.
Record the specific genetic subtype if determined.

Audit Caution

HCC Buddy guidance
Not all forms of chondrodysplasia punctata are peroxisomal in origin.
Ensure documentation confirms the peroxisomal (rhizomelic) type before assigning this code.
Non-peroxisomal forms have different codes and clinical implications.

Common Mistakes

HCC Buddy guidance
E71.541 (Zellweger-like syndrome) which has overlapping features but different pathogenesis
Q77.3 (Chondrodysplasia punctata) for non-peroxisomal forms of stippled epiphyses
E71.50 (Peroxisomal disorder, unspecified) which lacks the specificity of this diagnosis.

Current with CMS: FY2026 ICD-10-CM Apr 1 update (effective Apr 1 – Sep 30, 2026) · CMS-HCC V28, 100% phased in for payment year 2026. FY2027 code set already staged for October 1, 2026. How HCC Buddy stays current →

Is E71.540 an HCC code?

Yes. E71.540 maps to Other Significant Endocrine and Metabolic Disorders under the V24 model but is not retained in V28.

Code
E71.540
Description
Rhizomelic chondrodysplasia punctata
HCC (V28)
No CMS-HCC V28 mapping
RAF
Billable
Yes
Payment year
2026

HCC Category Mapping

V24HCC 23, Other Significant Endocrine and Metabolic Disorders
0.194
ESRDHCC 23, Other Significant Endocrine and Metabolic Disorders
0.036
RxHCCHCC 43, Other Significant Endocrine and Metabolic Disorders
0.063

Each model's RAF is its CMS base weight for that model's standard population, so weights are not directly comparable across models: CMS-HCC V28 and V24 use Community, Non-Dual, Aged; ESRD uses the dialysis continuing-enrollee model; RxHCC is the Part D continuing-enrollee, non-low-income, aged weight (a larger scale than CMS-HCC). ACA/HHS has no single weight — it varies by metal level. Actual per-patient RAF contribution depends on member segment, interactions, and the model year used by the payer. V28 is the CMS-HCC model phased in over payment years 2024–2026; V24 remains in use during the transition and for historical data.

Work E71.540 in the Code Book — tabular path, V28 RAF, and MEAT checklist →

MEAT Criteria for E71.540

For E71.540 to count as a valid HCC diagnosis in a given encounter, the provider's documentation must show MEAT: Monitor, Evaluate, Assess, or Treat. A diagnosis from a prior year does not carry forward automatically, it has to be re-documented and supported each calendar year.

  • MMonitor: signs, symptoms, disease progression, or lab trending documented in the note
  • EEvaluate: test results, medication response, or physical findings reviewed by the provider
  • AAssess: explicit mention in the assessment or plan with acknowledgment of status
  • TTreat: medication, referral, procedure, therapy, or counseling tied to the diagnosis

Only one of M/E/A/T is required to support the code, but the documentation must be specific enough to show that the provider actually addressed E71.540 during that encounter, not just copy-forwarded from a problem list.

Coder workflow notes

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What This Code Means

E71.540 is the ICD-10-CM diagnosis code for rhizomelic chondrodysplasia punctata. A rare genetic disorder affecting bone development and causing shortened limbs, intellectual disability, and vision problems due to abnormal peroxisome function. E71.540 sits in the ICD-10-CM chapter for endocrine, nutritional and metabolic diseases (e00-e89), within the section covering metabolic disorders (e70-e88).

Under the older CMS-HCC V24 model, E71.540 maps to Other Significant Endocrine and Metabolic Disorders (HCC 23) with a community, non-dual, aged base RAF weight of 0.194. V28 is the CMS-HCC risk adjustment model that reached 100% phase-in for payment year 2026, replacing V24 which was used during the PY2024–PY2025 transition.

This is a specific peroxisomal disorder; do not use the unspecified code E71.50 if this diagnosis is documented. Because E71.540 maps to a payment HCC, the provider's documentation must satisfy MEAT criteria (Monitor, Evaluate, Assess, or Treat) for the encounter to count toward the patient's Medicare Advantage risk adjustment score. When documentation is ambiguous, coders should issue a provider query rather than assume the highest-specificity variant.

HCC Buddy maintains structured V28 and V24 mapping, RAF weights, and MEAT documentation criteria for E71.540 sourced directly from the CMS-HCC risk adjustment model files and the CMS ICD-10-CM code set.

Coding Tips

  • This is a specific peroxisomal disorder; do not use the unspecified code E71.50 if this diagnosis is documented
  • Often requires genetic testing confirmation; ensure documentation supports the specific diagnosis before coding

Clinical Significance

Rhizomelic chondrodysplasia punctata is a severe peroxisomal disorder characterized by proximal limb shortening (rhizomelia), stippled calcification of epiphyses (chondrodysplasia punctata), cataracts, and severe intellectual disability. Multiple genetic subtypes exist, all involving defects in plasmalogen biosynthesis or peroxisomal protein import. Most affected children have severely shortened lifespan with the majority not surviving beyond age 10.

Documentation Requirements

  • Document radiographic findings showing stippled epiphyses and rhizomelic shortening, ophthalmologic findings (cataracts), plasmalogen levels (severely decreased), genetic testing identifying PEX7, GNPAT, or AGPS mutations, developmental status, and supportive care plan.
  • Record the specific genetic subtype if determined.

Commonly Confused Codes

  • E71.541 (Zellweger-like syndrome) which has overlapping features but different pathogenesis
  • Q77.3 (Chondrodysplasia punctata) for non-peroxisomal forms of stippled epiphyses
  • E71.50 (Peroxisomal disorder, unspecified) which lacks the specificity of this diagnosis.

Child Codes

Code Hierarchy

Because E71.540 maps to a payment HCC, the documentation must also satisfy MEAT criteria (Monitor, Evaluate, Assess, or Treat) for the encounter to count toward the patient's risk adjustment score.

Work E71.540 in HCC Buddy

Open E71.540 in the Code Book for the full Index-to-Tabular path, MEAT checklist, and V28 HCC mapping, or in the Encoder to code from a keyword search. Pro includes 7 days to try everything, no card required.